Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Gm27501-201ENSMUST00000183599 107 ntBASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Gm42627-201ENSMUST00000197347 224 ntBASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb9E9Q5G2 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Gm13786-201ENSMUST00000122371 333 ntBASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb9E9Q5G2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gm16296-201ENSMUST00000159905 325 ntBASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gm45331-201ENSMUST00000209868 554 ntBASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb9E9Q5G2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms