Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.78□□□□□ -0.52
Gm3543D3Z235 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Gm3543D3Z235 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3543D3Z235 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm22331-201ENSMUST00000158066 136 ntBASIC11.77□□□□□ -0.53
Gm3543D3Z235 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm45784-201ENSMUST00000188360 142 ntBASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm45841-201ENSMUST00000207700 164 ntBASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.77□□□□□ -0.53
Gm3543D3Z235 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Gm3543D3Z235 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.76□□□□□ -0.53
Gm3543D3Z235 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Gm12742-201ENSMUST00000117326 410 ntBASIC11.76□□□□□ -0.53
Gm3543D3Z235 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.76□□□□□ -0.53
Gm3543D3Z235 Gm10156-201ENSMUST00000122364 462 ntBASIC11.76□□□□□ -0.53
Gm3543D3Z235 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.76□□□□□ -0.53
Gm3543D3Z235 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Gm43818-201ENSMUST00000200605 466 ntBASIC11.76□□□□□ -0.53
Gm3543D3Z235 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.76□□□□□ -0.53
Gm3543D3Z235 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3543D3Z235 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms