Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.63□□□□□ -0.55
Shank1D3YZU1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shank1D3YZU1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm12208-201ENSMUST00000122004 163 ntBASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm44100-201ENSMUST00000204329 436 ntBASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.62□□□□□ -0.55
Shank1D3YZU1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.62□□□□□ -0.55
Shank1D3YZU1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Mir1943-201ENSMUST00000158276 73 ntBASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm5051-201ENSMUST00000204085 485 ntBASIC11.62□□□□□ -0.55
Shank1D3YZU1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shank1D3YZU1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.61□□□□□ -0.55
Shank1D3YZU1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Gm9550-201ENSMUST00000161130 862 ntBASIC11.61□□□□□ -0.55
Shank1D3YZU1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.61□□□□□ -0.55
Shank1D3YZU1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Gm8566-201ENSMUST00000120174 465 ntBASIC11.61□□□□□ -0.55
Shank1D3YZU1 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.61□□□□□ -0.55
Shank1D3YZU1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shank1D3YZU1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms