Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Gm18801-201ENSMUST00000186616 536 ntBASIC10.4□□□□□ -0.75
Chd6A3KFM7 Gm5870-201ENSMUST00000196461 282 ntBASIC10.4□□□□□ -0.75
Chd6A3KFM7 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Gm7238-201ENSMUST00000206467 973 ntBASIC10.4□□□□□ -0.75
Chd6A3KFM7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Gm5904-201ENSMUST00000210286 865 ntBASIC10.4□□□□□ -0.75
Chd6A3KFM7 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.4□□□□□ -0.75
Chd6A3KFM7 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Chd6A3KFM7 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Chd6A3KFM7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm11246-201ENSMUST00000120880 345 ntBASIC10.39□□□□□ -0.75
Chd6A3KFM7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm14213-201ENSMUST00000119778 768 ntBASIC10.39□□□□□ -0.75
Chd6A3KFM7 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm24943-201ENSMUST00000158329 433 ntBASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm8723-201ENSMUST00000166076 820 ntBASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm8701-201ENSMUST00000169259 874 ntBASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm43969-201ENSMUST00000204833 535 ntBASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.39□□□□□ -0.75
Chd6A3KFM7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd6A3KFM7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm15595-201ENSMUST00000120840 961 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm12196-201ENSMUST00000120954 262 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm43854-201ENSMUST00000200418 394 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms