Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb1A2AQ07 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb1A2AQ07 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Gm13123-201ENSMUST00000122173 492 ntBASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Gm12091-201ENSMUST00000146791 830 ntBASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.27□□□□□ -0.29
Tubb1A2AQ07 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb1A2AQ07 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Gm8805-201ENSMUST00000117848 313 ntBASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Gm7287-201ENSMUST00000205267 602 ntBASIC13.26□□□□□ -0.29
Tubb1A2AQ07 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Gm9908-201ENSMUST00000211534 448 ntBASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb1A2AQ07 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.25□□□□□ -0.29
Tubb1A2AQ07 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.25□□□□□ -0.29
Tubb1A2AQ07 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms