Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm17971-201ENSMUST00000190239 806 ntBASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm18027-201ENSMUST00000218947 619 ntBASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav8-1A0A075B641 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.27□□□□□ -0.92
Trav8-1A0A075B641 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav8-1A0A075B641 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trav8-1A0A075B641 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.27□□□□□ -0.92
Trav8-1A0A075B641 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav8-1A0A075B641 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav8-1A0A075B641 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav8-1A0A075B641 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav8-1A0A075B641 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gm15678-201ENSMUST00000117573 960 ntBASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 AA543401-201ENSMUST00000164248 1269 ntBASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Trav8-1A0A075B641 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms