Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Mir686-201ENSMUST00000102174 109 ntBASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm11918-201ENSMUST00000121660 179 ntBASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm7287-201ENSMUST00000205267 602 ntBASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cldn9Q9Z0S7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms