Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.01□□□□□ -0.49
ClcnkaQ9WUB7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm18263-201ENSMUST00000220846 1928 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm5303-201ENSMUST00000117943 1252 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm6152-201ENSMUST00000151704 340 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm45059-201ENSMUST00000205558 1077 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm5912-201ENSMUST00000122282 1438 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
ClcnkaQ9WUB7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Pck2-205ENSMUST00000226352 2784 ntBASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClcnkaQ9WUB7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 174.8 ms