Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Mir671-201ENSMUST00000102432 98 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm11956-201ENSMUST00000119525 512 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm12030-201ENSMUST00000121917 223 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm4862-201ENSMUST00000170405 438 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm18059-201ENSMUST00000208073 580 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm45575-201ENSMUST00000210283 548 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm9797-202ENSMUST00000218003 294 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col4a4Q9QZR9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm12990-201ENSMUST00000120372 468 ntBASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm19640-201ENSMUST00000214849 464 ntBASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.66□□□□□ -0.38
Col4a4Q9QZR9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Gm26286-201ENSMUST00000104166 134 ntBASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Gm11836-201ENSMUST00000121022 441 ntBASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 Gm27910-201ENSMUST00000185004 107 ntBASIC12.65□□□□□ -0.38
Col4a4Q9QZR9 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms