Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk1aQ9D132 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Gm43094-201ENSMUST00000196549 921 ntBASIC12.31□□□□□ -0.44
Upk1aQ9D132 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.31□□□□□ -0.44
Upk1aQ9D132 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.31□□□□□ -0.44
Upk1aQ9D132 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.31□□□□□ -0.44
Upk1aQ9D132 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk1aQ9D132 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Gm11978-201ENSMUST00000122315 466 ntBASIC12.3□□□□□ -0.44
Upk1aQ9D132 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Gm26464-201ENSMUST00000157094 305 ntBASIC12.3□□□□□ -0.44
Upk1aQ9D132 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.3□□□□□ -0.44
Upk1aQ9D132 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.3□□□□□ -0.44
Upk1aQ9D132 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk1aQ9D132 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk1aQ9D132 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms