Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssr1Q9CY50 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Gm29667-201ENSMUST00000190817 490 ntBASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Gm44872-201ENSMUST00000207864 420 ntBASIC14.17□□□□□ -0.14
Ssr1Q9CY50 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Gm17330-201ENSMUST00000221047 165 ntBASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr1Q9CY50 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.16□□□□□ -0.14
Ssr1Q9CY50 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Gm15678-201ENSMUST00000117573 960 ntBASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Gm27838-201ENSMUST00000184829 128 ntBASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr1Q9CY50 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms