Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chd1lQ9CXF7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.67□□□□□ -0.06
Chd1lQ9CXF7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gm15693-201ENSMUST00000120470 637 ntBASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gm44124-201ENSMUST00000204159 472 ntBASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd1lQ9CXF7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Gm24447-201ENSMUST00000083977 338 ntBASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd1lQ9CXF7 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.65□□□□□ -0.07
Chd1lQ9CXF7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Gm10253-201ENSMUST00000194270 940 ntBASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd1lQ9CXF7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms