Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.84□□□□□ -0.51
Smurf1Q9CUN6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smurf1Q9CUN6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Gm29541-201ENSMUST00000191351 678 ntBASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Gm5779-201ENSMUST00000218467 910 ntBASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smurf1Q9CUN6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smurf1Q9CUN6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms