Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Gm10012-201ENSMUST00000078252 192 ntBASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tlr3Q99MB1 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.96□□□□□ -0.17
Tlr3Q99MB1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gm14660-201ENSMUST00000119809 575 ntBASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gm8810-201ENSMUST00000172895 754 ntBASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gm28693-202ENSMUST00000190758 331 ntBASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gm37424-201ENSMUST00000191727 561 ntBASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tlr3Q99MB1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tlr3Q99MB1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Mir686-201ENSMUST00000102174 109 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gm7561-201ENSMUST00000211203 886 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gm6091-201ENSMUST00000098307 165 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.95□□□□□ -0.18
Tlr3Q99MB1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tlr3Q99MB1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tlr3Q99MB1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tlr3Q99MB1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms