Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.42□□□□□ -0.58
Scrt1Q99M85 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Gm7809-201ENSMUST00000153199 742 ntBASIC11.42□□□□□ -0.58
Scrt1Q99M85 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.42□□□□□ -0.58
Scrt1Q99M85 Gm7046-201ENSMUST00000221351 977 ntBASIC11.42□□□□□ -0.58
Scrt1Q99M85 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.42□□□□□ -0.58
Scrt1Q99M85 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scrt1Q99M85 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.41□□□□□ -0.58
Scrt1Q99M85 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gm14350-201ENSMUST00000116642 640 ntBASIC11.41□□□□□ -0.58
Scrt1Q99M85 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.41□□□□□ -0.58
Scrt1Q99M85 Nsd1-205ENSMUST00000224693 852 ntBASIC11.41□□□□□ -0.58
Scrt1Q99M85 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scrt1Q99M85 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.4□□□□□ -0.58
Scrt1Q99M85 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.4□□□□□ -0.58
Scrt1Q99M85 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.4□□□□□ -0.58
Scrt1Q99M85 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.4□□□□□ -0.58
Scrt1Q99M85 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.4□□□□□ -0.58
Scrt1Q99M85 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.4□□□□□ -0.58
Scrt1Q99M85 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms