Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Gm15371-201ENSMUST00000117057 784 ntBASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap3Q99LM2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap3Q99LM2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap3Q99LM2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.45□□□□□ -0.26
Cdk5rap3Q99LM2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms