Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb4Q91XZ6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Gm13689-201ENSMUST00000119360 685 ntBASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Gm38223-201ENSMUST00000194484 695 ntBASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb4Q91XZ6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm28631-201ENSMUST00000190740 334 ntBASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms