Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim60Q8VI40 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Trim60Q8VI40 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim60Q8VI40 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim60Q8VI40 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim60Q8VI40 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim60Q8VI40 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim60Q8VI40 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim60Q8VI40 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim60Q8VI40 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Syt7-204ENSMUST00000223586 1344 ntBASIC13.45□□□□□ -0.26
Trim60Q8VI40 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.45□□□□□ -0.26
Trim60Q8VI40 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm15321-201ENSMUST00000121290 288 ntBASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm12151-201ENSMUST00000121374 290 ntBASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.45□□□□□ -0.26
Trim60Q8VI40 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.45□□□□□ -0.26
Trim60Q8VI40 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim60Q8VI40 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.44□□□□□ -0.26
Trim60Q8VI40 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.44□□□□□ -0.26
Trim60Q8VI40 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.44□□□□□ -0.26
Trim60Q8VI40 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Trim60Q8VI40 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.44□□□□□ -0.26
Trim60Q8VI40 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.44□□□□□ -0.26
Trim60Q8VI40 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim60Q8VI40 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.43□□□□□ -0.26
Trim60Q8VI40 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Trim60Q8VI40 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.43□□□□□ -0.26
Trim60Q8VI40 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.43□□□□□ -0.26
Trim60Q8VI40 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim60Q8VI40 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms