Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd2Q8VE28 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Mir698-201ENSMUST00000102164 109 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Mir1247-201ENSMUST00000116706 82 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Gm5370-201ENSMUST00000187187 574 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Gm43818-201ENSMUST00000200605 466 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd2Q8VE28 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms