Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.42□□□□□ -0.1
Ddx39aQ8VDW0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm24548-201ENSMUST00000158650 108 ntBASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm19931-201ENSMUST00000198920 368 ntBASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ddx39aQ8VDW0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Gm13316-201ENSMUST00000140537 691 ntBASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Gm26083-201ENSMUST00000157904 193 ntBASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx39aQ8VDW0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.11
Ddx39aQ8VDW0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ddx39aQ8VDW0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx39aQ8VDW0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx39aQ8VDW0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx39aQ8VDW0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ddx39aQ8VDW0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms