Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.66□□□□□ -0.38
Q8VDP2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Q8VDP2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.66□□□□□ -0.38
Q8VDP2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Gm14494-201ENSMUST00000118786 435 ntBASIC12.66□□□□□ -0.38
Q8VDP2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.66□□□□□ -0.38
Q8VDP2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Gm27397-201ENSMUST00000184997 107 ntBASIC12.66□□□□□ -0.38
Q8VDP2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.66□□□□□ -0.38
Q8VDP2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Gm7787-201ENSMUST00000216858 688 ntBASIC12.66□□□□□ -0.38
Q8VDP2 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.66□□□□□ -0.38
Q8VDP2 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.66□□□□□ -0.38
Q8VDP2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Q8VDP2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.66□□□□□ -0.38
Q8VDP2 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.66□□□□□ -0.38
Q8VDP2 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Q8VDP2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.65□□□□□ -0.38
Q8VDP2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Q8VDP2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.65□□□□□ -0.38
Q8VDP2 Gm24513-201ENSMUST00000174964 138 ntBASIC12.65□□□□□ -0.38
Q8VDP2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Q8VDP2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.65□□□□□ -0.38
Q8VDP2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.65□□□□□ -0.38
Q8VDP2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.65□□□□□ -0.38
Q8VDP2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.65□□□□□ -0.38
Q8VDP2 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.65□□□□□ -0.38
Q8VDP2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.65□□□□□ -0.38
Q8VDP2 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Q8VDP2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Q8VDP2 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Q8VDP2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q8VDP2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Q8VDP2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Q8VDP2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.64□□□□□ -0.39
Q8VDP2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.64□□□□□ -0.39
Q8VDP2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.64□□□□□ -0.39
Q8VDP2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.64□□□□□ -0.39
Q8VDP2 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.64□□□□□ -0.39
Q8VDP2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Q8VDP2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.64□□□□□ -0.39
Q8VDP2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.64□□□□□ -0.39
Q8VDP2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q8VDP2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms