Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Gm22018-201ENSMUST00000104357 131 ntBASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ndc1Q8VCB1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ndc1Q8VCB1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Gm38002-201ENSMUST00000193255 180 ntBASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Gm43179-201ENSMUST00000198797 275 ntBASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Gm19309-201ENSMUST00000218295 205 ntBASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ndc1Q8VCB1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ndc1Q8VCB1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms