Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Gm5616-201ENSMUST00000165252 384 ntBASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Gm8741-201ENSMUST00000174736 384 ntBASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Gm9132-201ENSMUST00000210182 832 ntBASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Gm21811-201ENSMUST00000096485 930 ntBASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.62□□□□□ -0.39
Zc3h3Q8CHP0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gm37028-201ENSMUST00000194276 107 ntBASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gm9463-201ENSMUST00000206707 601 ntBASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gm45398-201ENSMUST00000210561 165 ntBASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Zc3h3Q8CHP0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Zc3h3Q8CHP0 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms