Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox30Q8CGW4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox30Q8CGW4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox30Q8CGW4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.19□□□□□ -0.14
Sox30Q8CGW4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox30Q8CGW4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Gm12341-201ENSMUST00000119724 503 ntBASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox30Q8CGW4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Mir7654-201ENSMUST00000185082 70 ntBASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.17□□□□□ -0.14
Sox30Q8CGW4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Gm18473-201ENSMUST00000220543 868 ntBASIC14.17□□□□□ -0.14
Sox30Q8CGW4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox30Q8CGW4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gm35960-201ENSMUST00000202712 767 ntBASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gm6458-201ENSMUST00000211573 635 ntBASIC14.16□□□□□ -0.14
Sox30Q8CGW4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Mir339-201ENSMUST00000083659 96 ntBASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms