Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps53Q8CCB4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Vps53Q8CCB4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps53Q8CCB4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Gm23931-201ENSMUST00000103842 109 ntBASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Gm6013-201ENSMUST00000212264 699 ntBASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps53Q8CCB4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gm16177-201ENSMUST00000120728 718 ntBASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gm42550-201ENSMUST00000201553 960 ntBASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.14■□□□□ 0.01
Vps53Q8CCB4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps53Q8CCB4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms