Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Gm16479-201ENSMUST00000121706 932 ntBASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Trim9Q8C7M3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Gm13813-201ENSMUST00000120998 787 ntBASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Gm27486-201ENSMUST00000184923 80 ntBASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim9Q8C7M3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Gm11637-201ENSMUST00000120601 592 ntBASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Gm22331-201ENSMUST00000158066 136 ntBASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Gm27331-201ENSMUST00000183705 60 ntBASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Gm27839-201ENSMUST00000184242 106 ntBASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Gm7561-201ENSMUST00000211203 886 ntBASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.31□□□□□ -0.12
Trim9Q8C7M3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim9Q8C7M3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms