Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm24514-201ENSMUST00000174961 285 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm2546-201ENSMUST00000182630 991 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm32025-201ENSMUST00000217960 307 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm13996-201ENSMUST00000118456 430 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm8913-201ENSMUST00000209491 641 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm15547-201ENSMUST00000122152 333 ntBASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm8099-201ENSMUST00000200510 742 ntBASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm45433-201ENSMUST00000209386 247 ntBASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm18734-201ENSMUST00000172937 808 ntBASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Gm45770-201ENSMUST00000212105 616 ntBASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a6Q8C6K9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms