Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smco3Q8BQM7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Gm13385-201ENSMUST00000121089 220 ntBASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Gm21470-201ENSMUST00000187680 696 ntBASIC10.68□□□□□ -0.7
Smco3Q8BQM7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Mzt1-203ENSMUST00000227948 952 ntBASIC10.68□□□□□ -0.7
Smco3Q8BQM7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms