Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm28071-201ENSMUST00000190355 478 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm18463-201ENSMUST00000207258 474 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm18460-201ENSMUST00000208088 464 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm8768-201ENSMUST00000220020 826 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm42511-201ENSMUST00000196160 234 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm45500-201ENSMUST00000211676 803 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smg1Q8BKX6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gm44158-201ENSMUST00000203881 505 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gm7851-201ENSMUST00000117574 323 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gm18201-201ENSMUST00000174735 875 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gm10731-201ENSMUST00000181171 448 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Mir8115-201ENSMUST00000184992 119 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smg1Q8BKX6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smg1Q8BKX6 Gm16166-201ENSMUST00000118291 787 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms