Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.58□□□□□ -0.39
Rnf38Q8BI21 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf38Q8BI21 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf38Q8BI21 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.58□□□□□ -0.39
Rnf38Q8BI21 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf38Q8BI21 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf38Q8BI21 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf38Q8BI21 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf38Q8BI21 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf38Q8BI21 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf38Q8BI21 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Gm27437-201ENSMUST00000183429 107 ntBASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.57□□□□□ -0.4
Rnf38Q8BI21 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf38Q8BI21 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rnf38Q8BI21 Gm22189-201ENSMUST00000103822 86 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms