Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Samm50Q8BGH2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Gm12928-201ENSMUST00000117115 573 ntBASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Gm8602-201ENSMUST00000184045 607 ntBASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Gm27892-201ENSMUST00000185017 106 ntBASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Gm17330-201ENSMUST00000221047 165 ntBASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Samm50Q8BGH2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Gm2495-201ENSMUST00000191160 466 ntBASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Samm50Q8BGH2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms