Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Mir339-201ENSMUST00000083659 96 ntBASIC12.98□□□□□ -0.33
Rpp38Q80UU2 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpp38Q80UU2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm12390-201ENSMUST00000117897 397 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm14704-201ENSMUST00000120300 874 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm7029-201ENSMUST00000173226 450 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpp38Q80UU2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpp38Q80UU2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpp38Q80UU2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Rpp38Q80UU2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpp38Q80UU2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rpp38Q80UU2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpp38Q80UU2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpp38Q80UU2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.95□□□□□ -0.34
Rpp38Q80UU2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms