Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Mir1247-201ENSMUST00000116706 82 ntBASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gm11793-201ENSMUST00000120433 981 ntBASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gm12363-201ENSMUST00000122250 668 ntBASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gm25261-201ENSMUST00000157416 134 ntBASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gm43118-201ENSMUST00000199149 775 ntBASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh19Q80TF3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Gm18584-201ENSMUST00000203098 964 ntBASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Gm3961-201ENSMUST00000204425 994 ntBASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Gm18935-201ENSMUST00000212692 664 ntBASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Gm5781-201ENSMUST00000219792 443 ntBASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh19Q80TF3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms