Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timd4Q6U7R4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Timd4Q6U7R4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Mir686-201ENSMUST00000102174 109 ntBASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Gm4271-201ENSMUST00000174444 973 ntBASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Timd4Q6U7R4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm28693-202ENSMUST00000190758 331 ntBASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.09□□□□□ -0.47
Timd4Q6U7R4 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.09□□□□□ -0.47
Timd4Q6U7R4 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm9899-201ENSMUST00000065519 555 ntBASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm10146-201ENSMUST00000072739 309 ntBASIC12.09□□□□□ -0.47
Timd4Q6U7R4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Timd4Q6U7R4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.47
Timd4Q6U7R4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms