Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC133083.1-201ENSMUST00000221736 2209 ntBASIC10.97□□□□□ -0.65
Rif1Q6PR54 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.97□□□□□ -0.65
Rif1Q6PR54 Gm12501-201ENSMUST00000119163 529 ntBASIC10.97□□□□□ -0.65
Rif1Q6PR54 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Rif1Q6PR54 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.97□□□□□ -0.65
Rif1Q6PR54 Gm18059-201ENSMUST00000208073 580 ntBASIC10.97□□□□□ -0.65
Rif1Q6PR54 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.97□□□□□ -0.65
Rif1Q6PR54 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rif1Q6PR54 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rif1Q6PR54 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.96□□□□□ -0.65
Rif1Q6PR54 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.96□□□□□ -0.65
Rif1Q6PR54 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rif1Q6PR54 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.96□□□□□ -0.66
Rif1Q6PR54 Gm15573-201ENSMUST00000119487 540 ntBASIC10.96□□□□□ -0.66
Rif1Q6PR54 Gm12990-201ENSMUST00000120372 468 ntBASIC10.96□□□□□ -0.66
Rif1Q6PR54 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.96□□□□□ -0.66
Rif1Q6PR54 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rif1Q6PR54 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.95□□□□□ -0.66
Rif1Q6PR54 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.95□□□□□ -0.66
Rif1Q6PR54 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.95□□□□□ -0.66
Rif1Q6PR54 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Gm45398-201ENSMUST00000210561 165 ntBASIC10.95□□□□□ -0.66
Rif1Q6PR54 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.95□□□□□ -0.66
Rif1Q6PR54 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.95□□□□□ -0.66
Rif1Q6PR54 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms