Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gm37201-201ENSMUST00000191845 523 ntBASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Snrnp40Q6PE01 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Snrnp40Q6PE01 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Snrnp40Q6PE01 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Snrnp40Q6PE01 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Snrnp40Q6PE01 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Snrnp40Q6PE01 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Snrnp40Q6PE01 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Snrnp40Q6PE01 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Snrnp40Q6PE01 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm13296-201ENSMUST00000117854 997 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12616-201ENSMUST00000118594 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Mir1943-201ENSMUST00000158276 73 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12624-201ENSMUST00000177615 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12621-201ENSMUST00000177760 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12615-201ENSMUST00000177970 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12622-201ENSMUST00000177975 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12627-201ENSMUST00000178412 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12625-201ENSMUST00000179122 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12614-201ENSMUST00000179586 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm12613-201ENSMUST00000180323 382 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm45224-201ENSMUST00000208203 414 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm8913-201ENSMUST00000209491 641 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Gm10312-201ENSMUST00000078515 489 ntBASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Snrnp40Q6PE01 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms