Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Gm42612-201ENSMUST00000197986 623 ntBASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Gm43170-201ENSMUST00000199827 612 ntBASIC14.37□□□□□ -0.11
Krt39Q6IFX4 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.37□□□□□ -0.11
Krt39Q6IFX4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt39Q6IFX4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt39Q6IFX4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Gm7063-201ENSMUST00000186840 981 ntBASIC14.35□□□□□ -0.11
Krt39Q6IFX4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms