Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.34■□□□□ 0.05
Ctr9Q62018 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ctr9Q62018 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ctr9Q62018 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.34■□□□□ 0.05
Ctr9Q62018 Gm19931-201ENSMUST00000198920 368 ntBASIC15.34■□□□□ 0.05
Ctr9Q62018 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.34■□□□□ 0.05
Ctr9Q62018 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ctr9Q62018 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ctr9Q62018 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ctr9Q62018 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.34■□□□□ 0.05
Ctr9Q62018 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ctr9Q62018 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ctr9Q62018 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ctr9Q62018 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.34■□□□□ 0.05
Ctr9Q62018 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ctr9Q62018 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ctr9Q62018 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.34■□□□□ 0.05
Ctr9Q62018 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Ctr9Q62018 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ctr9Q62018 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ctr9Q62018 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ctr9Q62018 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ctr9Q62018 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ctr9Q62018 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.33■□□□□ 0.05
Ctr9Q62018 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.33■□□□□ 0.05
Ctr9Q62018 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.33■□□□□ 0.05
Ctr9Q62018 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Ctr9Q62018 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Snord83b-201ENSMUST00000104546 94 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.33■□□□□ 0.04
Ctr9Q62018 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ctr9Q62018 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Gm7809-201ENSMUST00000153199 742 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Gm43118-201ENSMUST00000199149 775 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Gm32025-201ENSMUST00000217960 307 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Gm7399-201ENSMUST00000032395 858 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ctr9Q62018 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.33■□□□□ 0.04
Ctr9Q62018 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ctr9Q62018 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Ctr9Q62018 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ctr9Q62018 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ctr9Q62018 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ctr9Q62018 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.32■□□□□ 0.04
Ctr9Q62018 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ctr9Q62018 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.32■□□□□ 0.04
Ctr9Q62018 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.32■□□□□ 0.04
Ctr9Q62018 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Ctr9Q62018 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.32■□□□□ 0.04
Ctr9Q62018 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.32■□□□□ 0.04
Ctr9Q62018 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.32■□□□□ 0.04
Ctr9Q62018 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Ctr9Q62018 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ctr9Q62018 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.32■□□□□ 0.04
Ctr9Q62018 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.32■□□□□ 0.04
Ctr9Q62018 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ctr9Q62018 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ctr9Q62018 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ctr9Q62018 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms