Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim25Q61510 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim25Q61510 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.03□□□□□ -0.16
Trim25Q61510 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trim25Q61510 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim25Q61510 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trim25Q61510 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.02□□□□□ -0.16
Trim25Q61510 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim25Q61510 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trim25Q61510 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Gm15393-201ENSMUST00000120499 219 ntBASIC14.02□□□□□ -0.17
Trim25Q61510 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.02□□□□□ -0.17
Trim25Q61510 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim25Q61510 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.02□□□□□ -0.17
Trim25Q61510 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.02□□□□□ -0.17
Trim25Q61510 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim25Q61510 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim25Q61510 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim25Q61510 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim25Q61510 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.02□□□□□ -0.17
Trim25Q61510 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim25Q61510 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.02□□□□□ -0.17
Trim25Q61510 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.02□□□□□ -0.17
Trim25Q61510 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim25Q61510 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim25Q61510 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim25Q61510 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.02□□□□□ -0.17
Trim25Q61510 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim25Q61510 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim25Q61510 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.01□□□□□ -0.17
Trim25Q61510 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trim25Q61510 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim25Q61510 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim25Q61510 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.01□□□□□ -0.17
Trim25Q61510 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim25Q61510 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.01□□□□□ -0.17
Trim25Q61510 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.01□□□□□ -0.17
Trim25Q61510 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms