Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sox17Q61473 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sox17Q61473 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox17Q61473 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.17□□□□□ -0.46
Sox17Q61473 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox17Q61473 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.17□□□□□ -0.46
Sox17Q61473 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox17Q61473 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox17Q61473 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox17Q61473 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox17Q61473 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox17Q61473 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Sox17Q61473 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Sox17Q61473 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Daam2-202ENSMUST00000224595 1926 ntBASIC12.16□□□□□ -0.46
Sox17Q61473 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm15693-201ENSMUST00000120470 637 ntBASIC12.16□□□□□ -0.46
Sox17Q61473 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox17Q61473 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.16□□□□□ -0.46
Sox17Q61473 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.16□□□□□ -0.46
Sox17Q61473 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sox17Q61473 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 AW822252-206ENSMUST00000208904 237 ntBASIC12.16□□□□□ -0.46
Sox17Q61473 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms