Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm14585-201ENSMUST00000120713 634 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm5257-201ENSMUST00000121823 790 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm6485-201ENSMUST00000160676 439 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm14724-201ENSMUST00000118400 537 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm15036-201ENSMUST00000118880 400 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm4726-201ENSMUST00000135604 736 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm6019-201ENSMUST00000148369 736 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Gm18059-201ENSMUST00000208073 580 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.11□□□□□ -0.31
Bdp1Q571C7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.11□□□□□ -0.31
Bdp1Q571C7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.1□□□□□ -0.31
Bdp1Q571C7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.1□□□□□ -0.31
Bdp1Q571C7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.1□□□□□ -0.31
Bdp1Q571C7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC13.1□□□□□ -0.31
Bdp1Q571C7 Gm45527-201ENSMUST00000211052 774 ntBASIC13.1□□□□□ -0.31
Bdp1Q571C7 Gm45594-201ENSMUST00000211717 241 ntBASIC13.1□□□□□ -0.31
Bdp1Q571C7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms