Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Gm10012-201ENSMUST00000078252 192 ntBASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cdkl5Q3UTQ8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdkl5Q3UTQ8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cdkl5Q3UTQ8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cdkl5Q3UTQ8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdkl5Q3UTQ8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cdkl5Q3UTQ8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdkl5Q3UTQ8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Gm13123-201ENSMUST00000122173 492 ntBASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Gm8810-201ENSMUST00000172895 754 ntBASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Cdkl5Q3UTQ8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Gm11478-201ENSMUST00000117851 599 ntBASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.04■□□□□ -0
Cdkl5Q3UTQ8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Rubie-203ENSMUST00000227803 2430 ntBASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdkl5Q3UTQ8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms