Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Gm17391-201ENSMUST00000171036 126 ntBASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Gm27627-201ENSMUST00000183644 150 ntBASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Gm38092-201ENSMUST00000195600 653 ntBASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fam196aQ3USH1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Fam196aQ3USH1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Fam196aQ3USH1 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.02□□□□□ -0.32
Fam196aQ3USH1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Fam196aQ3USH1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fam196aQ3USH1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fam196aQ3USH1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fam196aQ3USH1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fam196aQ3USH1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.02□□□□□ -0.32
Fam196aQ3USH1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Gm12380-201ENSMUST00000119012 544 ntBASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.02□□□□□ -0.33
Fam196aQ3USH1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.02□□□□□ -0.33
Fam196aQ3USH1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Fam196aQ3USH1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Gm13736-201ENSMUST00000119272 253 ntBASIC13.01□□□□□ -0.33
Fam196aQ3USH1 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Gm45598-202ENSMUST00000210719 986 ntBASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Gm5369-201ENSMUST00000217499 588 ntBASIC13.01□□□□□ -0.33
Fam196aQ3USH1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms