Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm19163-201ENSMUST00000223313 780 ntBASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm9396-201ENSMUST00000076703 567 ntBASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm10268-201ENSMUST00000085340 555 ntBASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Gm13226-201ENSMUST00000117838 404 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Gm14660-201ENSMUST00000119809 575 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Gm27731-201ENSMUST00000185192 107 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc4Q3UP44 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Gm13813-201ENSMUST00000120998 787 ntBASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Gm43433-201ENSMUST00000196573 481 ntBASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Gm4768-201ENSMUST00000206199 686 ntBASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nhlrc4Q3UP44 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms