Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nlrc4Q3UP24 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Snord83b-201ENSMUST00000104546 94 ntBASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nlrc4Q3UP24 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Gm17208-201ENSMUST00000168388 535 ntBASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Gm32025-201ENSMUST00000217960 307 ntBASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Gm19163-201ENSMUST00000223313 780 ntBASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nlrc4Q3UP24 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms