Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.22■□□□□ 0.03
Col5a2Q3U962 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.21■□□□□ 0.03
Col5a2Q3U962 Mir7686-201ENSMUST00000200604 57 ntBASIC15.21■□□□□ 0.03
Col5a2Q3U962 Gm4482-201ENSMUST00000200876 742 ntBASIC15.21■□□□□ 0.03
Col5a2Q3U962 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Gm270-201ENSMUST00000223010 976 ntBASIC15.21■□□□□ 0.03
Col5a2Q3U962 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.21■□□□□ 0.03
Col5a2Q3U962 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.21■□□□□ 0.03
Col5a2Q3U962 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.21■□□□□ 0.03
Col5a2Q3U962 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col5a2Q3U962 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col5a2Q3U962 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col5a2Q3U962 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.21■□□□□ 0.02
Col5a2Q3U962 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col5a2Q3U962 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.2■□□□□ 0.02
Col5a2Q3U962 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Gm18038-201ENSMUST00000197900 485 ntBASIC15.2■□□□□ 0.02
Col5a2Q3U962 Gm43962-201ENSMUST00000203898 190 ntBASIC15.2■□□□□ 0.02
Col5a2Q3U962 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.2■□□□□ 0.02
Col5a2Q3U962 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.2■□□□□ 0.02
Col5a2Q3U962 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.2■□□□□ 0.02
Col5a2Q3U962 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col5a2Q3U962 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.19■□□□□ 0.02
Col5a2Q3U962 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.19■□□□□ 0.02
Col5a2Q3U962 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.19■□□□□ 0.02
Col5a2Q3U962 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms