Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tff1Q08423 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.83□□□□□ -0.68
Tff1Q08423 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.82□□□□□ -0.68
Tff1Q08423 Gm12742-201ENSMUST00000117326 410 ntBASIC10.82□□□□□ -0.68
Tff1Q08423 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.82□□□□□ -0.68
Tff1Q08423 Gm45841-201ENSMUST00000207700 164 ntBASIC10.82□□□□□ -0.68
Tff1Q08423 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.82□□□□□ -0.68
Tff1Q08423 Gm5035-201ENSMUST00000215581 927 ntBASIC10.82□□□□□ -0.68
Tff1Q08423 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.82□□□□□ -0.68
Tff1Q08423 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.82□□□□□ -0.68
Tff1Q08423 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Tff1Q08423 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.82□□□□□ -0.68
Tff1Q08423 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Tff1Q08423 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.82□□□□□ -0.68
Tff1Q08423 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tff1Q08423 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tff1Q08423 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tff1Q08423 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Tff1Q08423 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tff1Q08423 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tff1Q08423 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tff1Q08423 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 Gm12403-201ENSMUST00000121384 959 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.81□□□□□ -0.68
Tff1Q08423 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tff1Q08423 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Tff1Q08423 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.81□□□□□ -0.68
Tff1Q08423 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.81□□□□□ -0.68
Tff1Q08423 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.81□□□□□ -0.68
Tff1Q08423 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms