Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Gm12164-201ENSMUST00000121695 551 ntBASIC18.04■□□□□ 0.48
Xrn1P97789 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Xrn1P97789 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC18.04■□□□□ 0.48
Xrn1P97789 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Xrn1P97789 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC18.04■□□□□ 0.48
Xrn1P97789 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC18.04■□□□□ 0.48
Xrn1P97789 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Xrn1P97789 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Xrn1P97789 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Gm6485-201ENSMUST00000160676 439 ntBASIC18.03■□□□□ 0.48
Xrn1P97789 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Xrn1P97789 Gm8343-201ENSMUST00000182705 994 ntBASIC18.03■□□□□ 0.48
Xrn1P97789 Mir7677-201ENSMUST00000184226 67 ntBASIC18.03■□□□□ 0.48
Xrn1P97789 Mir8115-201ENSMUST00000184992 119 ntBASIC18.03■□□□□ 0.48
Xrn1P97789 Gm43520-201ENSMUST00000197996 164 ntBASIC18.03■□□□□ 0.48
Xrn1P97789 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Xrn1P97789 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Xrn1P97789 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Xrn1P97789 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Gm14760-201ENSMUST00000121831 999 ntBASIC18.03■□□□□ 0.48
Xrn1P97789 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Xrn1P97789 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC18.03■□□□□ 0.48
Xrn1P97789 Gm8492-201ENSMUST00000182375 987 ntBASIC18.03■□□□□ 0.48
Xrn1P97789 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC18.03■□□□□ 0.48
Xrn1P97789 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC18.03■□□□□ 0.48
Xrn1P97789 AC159103.1-201ENSMUST00000228325 429 ntBASIC18.03■□□□□ 0.48
Xrn1P97789 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.03■□□□□ 0.48
Xrn1P97789 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Xrn1P97789 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Xrn1P97789 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Xrn1P97789 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Xrn1P97789 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Xrn1P97789 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Xrn1P97789 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Xrn1P97789 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Xrn1P97789 Gm7722-201ENSMUST00000120646 741 ntBASIC18.02■□□□□ 0.48
Xrn1P97789 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC18.02■□□□□ 0.48
Xrn1P97789 Rprl1-201ENSMUST00000158050 327 ntBASIC18.02■□□□□ 0.48
Xrn1P97789 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC18.02■□□□□ 0.48
Xrn1P97789 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC18.02■□□□□ 0.48
Xrn1P97789 AC151275.1-201ENSMUST00000224870 585 ntBASIC18.02■□□□□ 0.48
Xrn1P97789 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Xrn1P97789 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Xrn1P97789 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Xrn1P97789 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Xrn1P97789 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Xrn1P97789 Gm43721-201ENSMUST00000199677 2313 ntBASIC18.02■□□□□ 0.47
Xrn1P97789 Gm44851-201ENSMUST00000205735 2309 ntBASIC18.02■□□□□ 0.47
Xrn1P97789 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Xrn1P97789 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Xrn1P97789 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Xrn1P97789 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC18.01■□□□□ 0.47
Xrn1P97789 Gm11675-201ENSMUST00000121873 832 ntBASIC18.01■□□□□ 0.47
Xrn1P97789 Mir7076-201ENSMUST00000183519 74 ntBASIC18.01■□□□□ 0.47
Xrn1P97789 Ighv4-2-201ENSMUST00000192975 362 ntBASIC18.01■□□□□ 0.47
Xrn1P97789 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC18.01■□□□□ 0.47
Xrn1P97789 Gm4607-201ENSMUST00000206649 577 ntBASIC18.01■□□□□ 0.47
Xrn1P97789 AC093022.5-201ENSMUST00000226841 1079 ntBASIC18.01■□□□□ 0.47
Xrn1P97789 AC171241.1-201ENSMUST00000228144 1166 ntBASIC18.01■□□□□ 0.47
Xrn1P97789 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Xrn1P97789 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Gm10288-201ENSMUST00000084614 537 ntBASIC18.01■□□□□ 0.47
Xrn1P97789 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.01■□□□□ 0.47
Xrn1P97789 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC18.01■□□□□ 0.47
Xrn1P97789 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Xrn1P97789 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms