Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC8.57□□□□□ -1.04
PrkdcP97313 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PrkdcP97313 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
PrkdcP97313 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PrkdcP97313 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
PrkdcP97313 Gm12453-201ENSMUST00000121981 331 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm12906-201ENSMUST00000154610 441 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm43186-201ENSMUST00000198130 824 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC8.56□□□□□ -1.04
PrkdcP97313 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 AC130823.1-201ENSMUST00000228929 1549 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC8.56□□□□□ -1.04
PrkdcP97313 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm25766-201ENSMUST00000104101 131 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm39288-201ENSMUST00000210554 446 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 AC166344.1-201ENSMUST00000223745 674 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm43267-201ENSMUST00000199664 1796 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm5639-201ENSMUST00000122305 2403 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm5863-201ENSMUST00000121760 1008 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm17796-201ENSMUST00000189015 1213 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Gm44270-201ENSMUST00000203084 1234 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm43447-201ENSMUST00000198471 1535 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm7211-201ENSMUST00000172692 1118 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Gm18367-201ENSMUST00000176139 600 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Gm3551-201ENSMUST00000190750 664 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Gm6390-201ENSMUST00000215034 589 ntBASIC8.56□□□□□ -1.04
PrkdcP97313 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC8.56□□□□□ -1.04
PrkdcP97313 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
PrkdcP97313 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PrkdcP97313 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PrkdcP97313 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm11619-201ENSMUST00000117474 237 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Gm24328-201ENSMUST00000175104 67 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC8.55□□□□□ -1.04
PrkdcP97313 Gm6644-201ENSMUST00000186507 951 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC8.55□□□□□ -1.04
PrkdcP97313 AC154252.2-201ENSMUST00000223593 767 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Gm23680-201ENSMUST00000083162 164 ntBASIC8.55□□□□□ -1.04
PrkdcP97313 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PrkdcP97313 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 212.2 ms