Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Crnkl1P63154 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.88□□□□□ -0.35
Crnkl1P63154 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Crnkl1P63154 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Crnkl1P63154 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Crnkl1P63154 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Crnkl1P63154 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Crnkl1P63154 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Crnkl1P63154 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Crnkl1P63154 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Crnkl1P63154 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Crnkl1P63154 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.87□□□□□ -0.35
Crnkl1P63154 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gm27533-201ENSMUST00000183800 152 ntBASIC12.87□□□□□ -0.35
Crnkl1P63154 Mir7023-201ENSMUST00000185093 64 ntBASIC12.87□□□□□ -0.35
Crnkl1P63154 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Crnkl1P63154 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.87□□□□□ -0.35
Crnkl1P63154 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Crnkl1P63154 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.86□□□□□ -0.35
Crnkl1P63154 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Crnkl1P63154 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.86□□□□□ -0.35
Crnkl1P63154 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Daam2-202ENSMUST00000224595 1926 ntBASIC12.86□□□□□ -0.35
Crnkl1P63154 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.86□□□□□ -0.35
Crnkl1P63154 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Crnkl1P63154 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Crnkl1P63154 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Crnkl1P63154 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.86□□□□□ -0.35
Crnkl1P63154 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.86□□□□□ -0.35
Crnkl1P63154 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Crnkl1P63154 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.86□□□□□ -0.35
Crnkl1P63154 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Crnkl1P63154 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.86□□□□□ -0.35
Crnkl1P63154 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Crnkl1P63154 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Crnkl1P63154 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Crnkl1P63154 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Crnkl1P63154 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Crnkl1P63154 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Crnkl1P63154 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms